Last updated on 2022-09-11 12:56:28 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.3 | 12.02 | 232.31 | 244.33 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.1.3 | 10.25 | 168.85 | 179.10 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.1.3 | 293.61 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.3 | 286.67 | NOTE | |||
| r-devel-windows-x86_64 | 0.1.3 | 57.00 | 282.00 | 339.00 | OK | |
| r-patched-linux-x86_64 | 0.1.3 | 17.75 | 212.01 | 229.76 | OK | |
| r-release-linux-x86_64 | 0.1.3 | 10.17 | 213.28 | 223.45 | OK | |
| r-release-macos-arm64 | 0.1.3 | 72.00 | NOTE | |||
| r-release-macos-x86_64 | 0.1.3 | 146.00 | NOTE | |||
| r-release-windows-x86_64 | 0.1.3 | 112.00 | 277.00 | 389.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.3 | 134.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 0.1.3 | 111.00 | NOTE | |||
| r-oldrel-windows-ix86+x86_64 | 0.1.3 | 25.00 | 278.00 | 303.00 | OK |
Version: 0.1.3
Check: tests
Result: ERROR
Running 'testthat.R' [27s/33s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(sapfluxnetr)
>
> test_check("sapfluxnetr")
[1] "processing site ARG_MAZ (1 of 3)"
[1] "processing site ARG_TRE (2 of 3)"
[1] "processing site AUS_CAN_ST2_MIX (3 of 3)"
[1] "processing site ARG_MAZ (1 of 3)"
[1] "processing site ARG_TRE (2 of 3)"
[1] "processing site AUS_CAN_ST2_MIX (3 of 3)"
[1] "processing site ARG_MAZ (1 of 3)"
[1] "processing site ARG_TRE (2 of 3)"
[1] "processing site AUS_CAN_ST2_MIX (3 of 3)"
Error in validObject(object) :
invalid class "sfn_data" object: 1: nrow(sapf_data) != nrow(env_data)
invalid class "sfn_data" object: 2: nrow(sapf_data) != length(timestamp) | nrow(env_data) != length(timestamp)
invalid class "sfn_data" object: 3: nrow(*_flags) =! nrow(*_flags) | nrow(*_flags) =! nrow(*_data)
Error in validObject(object) :
invalid class "sfn_data" object: 1: nrow(sapf_data) != nrow(env_data)
invalid class "sfn_data" object: 2: nrow(sapf_data) != length(timestamp) | nrow(env_data) != length(timestamp)
invalid class "sfn_data" object: 3: nrow(*_flags) =! nrow(*_flags) | nrow(*_flags) =! nrow(*_data)
Error in validObject(object) :
invalid class "sfn_data" object: 1: nrow(*_flags) =! nrow(*_flags) | nrow(*_flags) =! nrow(*_data)
invalid class "sfn_data" object: 2: nrow(sapf_flags) != length(timestamp) | nrow(env_flags) != length(timestamp)
Error in validObject(object) :
invalid class "sfn_data" object: 1: nrow(*_flags) =! nrow(*_flags) | nrow(*_flags) =! nrow(*_data)
invalid class "sfn_data" object: 2: nrow(sapf_flags) != length(timestamp) | nrow(env_flags) != length(timestamp)
Error in validObject(object) :
invalid class "sfn_data" object: 1: nrow(sapf_data) != length(timestamp) | nrow(env_data) != length(timestamp)
invalid class "sfn_data" object: 2: length(timestamp) != length(solar_timestamp)
invalid class "sfn_data" object: 3: nrow(sapf_flags) != length(timestamp) | nrow(env_flags) != length(timestamp)
Error in validObject(object) :
invalid class "sfn_data" object: length(timestamp) != length(solar_timestamp)
Error in validObject(object) :
invalid class "sfn_data" object: si_code slot can not be an empty string
Error in validObject(object) :
invalid class "sfn_data" object: si_code must be of length = 1
Error in validObject(object) :
invalid class "sfn_data" object: metadata slots can not be 0-row data frames
[ FAIL 4 | WARN 8 | SKIP 19 | PASS 347 ]
== Skipped tests ===============================================================
* On CRAN (19)
== Failed tests ================================================================
-- Failure (test-sfn_data_classes.R:562:3): show methods works -----------------
`print\(ARG_TRE\)` does not match "Data from ARG_TRE site".
Actual value: "sfn_data object\\nData from ARG_TRE site\\n\\nData kindly provided by Seabstian Pfautsch from University of Sydney\\nand Pablo Peri from Instituto Nacional de Tecnolog\\xeda Agropecuaria \\n\\nSite related literature: DOI 10\.1007/s00468-013-0935-4 \\n\\nSapflow data: 312 observations of 4 trees/plants\\nSpecies present: Nothofagus antarctica \\n\\nEnvironmental data: 312 observations\.\\nVariables present:\\n ta rh vpd sw_in ws precip swc_shallow ppfd_in ext_rad \\n\\nBiome: Woodland/Shrubland \\n\\nTIMESTAMP span: 2009-11-18 -03--2009-11-30 23:00:00 -03 \\n\\nSolar TIMESTAMP span: 2009-11-17 22:24:58 UTC--2009-11-30 21:20:48 UTC \\n\\nSapflow data flags:\\nNo flags present\\n\\nEnvironmental data flags:\\nRANGE_WARN OUT_WARN CALCULATED \\n 18 24 624 \\n"
Backtrace:
x
1. \-testthat::expect_output(print(ARG_TRE), "Data from ARG_TRE site") at test-sfn_data_classes.R:562:2
2. \-testthat::expect_match(...)
3. \-testthat:::expect_match_(...)
-- Failure (test-sfn_data_classes.R:563:3): show methods works -----------------
`print\(ARG_TRE\)` does not match "Environmental data flags:".
Actual value: "sfn_data object\\nData from ARG_TRE site\\n\\nData kindly provided by Seabstian Pfautsch from University of Sydney\\nand Pablo Peri from Instituto Nacional de Tecnolog\\xeda Agropecuaria \\n\\nSite related literature: DOI 10\.1007/s00468-013-0935-4 \\n\\nSapflow data: 312 observations of 4 trees/plants\\nSpecies present: Nothofagus antarctica \\n\\nEnvironmental data: 312 observations\.\\nVariables present:\\n ta rh vpd sw_in ws precip swc_shallow ppfd_in ext_rad \\n\\nBiome: Woodland/Shrubland \\n\\nTIMESTAMP span: 2009-11-18 -03--2009-11-30 23:00:00 -03 \\n\\nSolar TIMESTAMP span: 2009-11-17 22:24:58 UTC--2009-11-30 21:20:48 UTC \\n\\nSapflow data flags:\\nNo flags present\\n\\nEnvironmental data flags:\\nRANGE_WARN OUT_WARN CALCULATED \\n 18 24 624 \\n"
Backtrace:
x
1. \-testthat::expect_output(print(ARG_TRE), "Environmental data flags:") at test-sfn_data_classes.R:563:2
2. \-testthat::expect_match(...)
3. \-testthat:::expect_match_(...)
-- Failure (test-sfn_data_classes.R:564:3): show methods works -----------------
`print\(ARG_MAZ\)` does not match "Data from ARG_MAZ site".
Actual value: "sfn_data object\\nData from ARG_MAZ site\\n\\nData kindly provided by Sebastian Pfautsch from University of Sydney\\nand Pablo Peri from Instituto Nacional de Tecnolog\\xeda Agropecuaria \\n\\nSite related literature: DOI 10\.1007/s00468-013-0935-4 \\n\\nSapflow data: 288 observations of 5 trees/plants\\nSpecies present: Nothofagus pumilio \\n\\nEnvironmental data: 288 observations\.\\nVariables present:\\n ta rh vpd sw_in ws precip swc_shallow ppfd_in ext_rad \\n\\nBiome: Woodland/Shrubland \\n\\nTIMESTAMP span: 2009-11-19 -03--2009-11-30 23:00:00 -03 \\n\\nSolar TIMESTAMP span: 2009-11-18 22:24:18 UTC--2009-11-30 21:20:24 UTC \\n\\nSapflow data flags:\\nNo flags present\\n\\nEnvironmental data flags:\\nRANGE_WARN OUT_WARN CALCULATED \\n 9 17 576 \\n"
Backtrace:
x
1. \-testthat::expect_output(print(ARG_MAZ), "Data from ARG_MAZ site") at test-sfn_data_classes.R:564:2
2. \-testthat::expect_match(...)
3. \-testthat:::expect_match_(...)
-- Failure (test-sfn_data_classes.R:565:3): show methods works -----------------
`print\(ARG_MAZ\)` does not match "Environmental data flags:".
Actual value: "sfn_data object\\nData from ARG_MAZ site\\n\\nData kindly provided by Sebastian Pfautsch from University of Sydney\\nand Pablo Peri from Instituto Nacional de Tecnolog\\xeda Agropecuaria \\n\\nSite related literature: DOI 10\.1007/s00468-013-0935-4 \\n\\nSapflow data: 288 observations of 5 trees/plants\\nSpecies present: Nothofagus pumilio \\n\\nEnvironmental data: 288 observations\.\\nVariables present:\\n ta rh vpd sw_in ws precip swc_shallow ppfd_in ext_rad \\n\\nBiome: Woodland/Shrubland \\n\\nTIMESTAMP span: 2009-11-19 -03--2009-11-30 23:00:00 -03 \\n\\nSolar TIMESTAMP span: 2009-11-18 22:24:18 UTC--2009-11-30 21:20:24 UTC \\n\\nSapflow data flags:\\nNo flags present\\n\\nEnvironmental data flags:\\nRANGE_WARN OUT_WARN CALCULATED \\n 9 17 576 \\n"
Backtrace:
x
1. \-testthat::expect_output(print(ARG_MAZ), "Environmental data flags:") at test-sfn_data_classes.R:565:2
2. \-testthat::expect_match(...)
3. \-testthat:::expect_match_(...)
[ FAIL 4 | WARN 8 | SKIP 19 | PASS 347 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.1.3
Check: data for non-ASCII characters
Result: NOTE
Note: found 4 marked UTF-8 strings
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64