ABC.RAP: Array Based CpG Region Analysis Pipeline

It aims to identify candidate genes that are “differentially methylated” between cases and controls. It applies Student’s t-test and delta beta analysis to identify candidate genes containing multiple “CpG sites”.

Version:	0.9.0
Depends:	R (≥ 3.1.0)
Imports:	graphics, stats, utils
Suggests:	knitr, rmarkdown
Published:	2016-10-20
Author:	Abdulmonem Alsaleh [cre, aut], Robert Weeks [aut], Ian Morison [aut], RStudio [ctb]
Maintainer:	Abdulmonem Alsaleh <a.alsaleh at hotmail.co.nz>
Contact:	Ian Morison <ian.morison@otago.ac.nz>
License:	GPL-3
NeedsCompilation:	no
SystemRequirements:	GNU make
CRAN checks:	ABC.RAP results

Documentation:

Reference manual:	ABC.RAP.pdf
Vignettes:	Array Based CpG Region Analysis Package (ABC.RAP)

Downloads:

Package source:	ABC.RAP_0.9.0.tar.gz
Windows binaries:	r-devel: ABC.RAP_0.9.0.zip, r-release: ABC.RAP_0.9.0.zip, r-oldrel: ABC.RAP_0.9.0.zip
macOS binaries:	r-release (arm64): ABC.RAP_0.9.0.tgz, r-oldrel (arm64): ABC.RAP_0.9.0.tgz, r-release (x86_64): ABC.RAP_0.9.0.tgz, r-oldrel (x86_64): ABC.RAP_0.9.0.tgz

Linking:

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