HumMeth27QCReport: HumMeth27QCReport: quality control and preprocessing of Illumina's Infinium methylation assays

HumMeth27QCReport is a tool for quality control and preprocessing of Illumina's Infinium BeadChip methylation assays. The automated analysis pipeline comprises data import, normalization, quality diagnostics and data export.

Version: 1.2.14
Depends: R (≥ 2.13.0), methylumi, lumi, IlluminaHumanMethylation27k.db, IlluminaHumanMethylation450k.db, amap, Hmisc, gplots, plotrix, WriteXLS, tcltk2
Imports: AnnotationDbi (≥ 0.0.89), Biobase (≥ 1.15.29)
Published: 2012-07-09
Author: F.M. Mancuso, G. Roma
Maintainer: F.M. Mancuso <francesco.mancuso at crg.eu>
License: GPL-2
NeedsCompilation: no
CRAN checks: HumMeth27QCReport results

Downloads:

Package source: HumMeth27QCReport_1.2.14.tar.gz
MacOS X binary: HumMeth27QCReport_1.2.14.tgz
Windows binary: HumMeth27QCReport_1.2.14.zip
Reference manual: HumMeth27QCReport.pdf
News/ChangeLog:NEWS
Old sources: HumMeth27QCReport archive