IBDsim: Simulation of chromosomal regions shared by family members
R package for simulation of IBD sharing among family
members. Using sex specific recombination rates from the Decode
map (2010) of the human genome, phased chromosomes are
simulated for all pedigree members, either by unconditional
'gene dropping' or conditional on a specified IBD pattern.
Regions compatible with the query IBD pattern (possibly
different from the conditional pattern) are subsequently
detected and summarized.
| Version: |
0.9-2 |
| Depends: |
R (≥ 2.15), paramlink (≥ 0.7) |
| Published: |
2012-12-18 |
| Author: |
Magnus Dehli Vigeland |
| Maintainer: |
Magnus Dehli Vigeland <magnusdv at studmed.uio.no> |
| License: |
GPL (≥ 2) |
| NeedsCompilation: |
yes |
| CRAN checks: |
IBDsim results |
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