LDlinkR 1.2.2

LDlinkR 1.2.1

Update version number
Fix bug in LDexpress that returned GRCH37 results when genome build was GRCh38 or GRCh38 High Coverage.
Fix bug in LDproxy handling of error/warning messages in response data.
Update RoxygenNote to 7.2.0

Submission date: 2022-05-11
Issue #13 - Add new argument to LDhap (table_type) with four options for different types data output.
Issue #14 - Fix LDhap valid input check for number of input ‘snps’, line 94.
Add ‘snps’ to the WORDLIST
Update test-ldhap with additional tests
Update vignette with new LDhap usage examples with new argument.
Make LDhap able to write to file for both types of data returned by the new ‘table_type’ options.
Add feature ‘genome_build’ to support different genome builds, GRCh37(hg19), GRCh38(hg38), and GRCh38 High Coverage.
Improve/update error and warning message returned in the response data from the LDlink API server.
Fix CRAN note about ‘LazyData’ by removing line from Description file.
Update README file.
Add testthat tests for feature genome_build
Add three new Illumina chips to SNPchip
Add two new Affymetrix chips to SNPchip
Major update to vignette with new feature genome_build

Submission date: 2021-02-19
Add link to LDlink web site documentation.
Correct code chunk in vignette FAQ #4, changed option to eval=FALSE; this vignette code chunk no longer requires an internet resource
added notes to README and vignette that ‘internet access required’ to use
Add code to check if required internet resources are available per CRAN

Release date: 2021-02-02
Added three new functions, LDtrait, LDexpress & list_gtex_tissues
Updated vignette with new descriptions of functions and examples.
Major update to README.md, including basic examples
Added a NEWS.md file to track changes to the package.
Issue #2, fixed warning message from write.table in LDproxy_batch when append = TRUE
Updated most function descriptions on package help page
Added spell checking for building package