The Cancer Genome Atlas (TCGA) is a program aimed at improving our understanding of Cancer Biology. Several TCGA Datasets are available online. 'TCGAretriever' helps accessing and downloading TCGA data hosted on 'cBioPortal' via its Web Interface (see <http://www.cbioportal.org/> for more information). 'TCGAretriever' is easy to use (get all the TCGA data you need with a few lines of code), enforces reliable data download (via 'httr'), and is suitable for downloading large volumes of data.
Version: | 1.5 |
Depends: | R (≥ 3.1) |
Imports: | httr |
Suggests: | graphics, utils, knitr, rmarkdown |
Published: | 2019-12-17 |
Author: | Damiano Fantini |
Maintainer: | Damiano Fantini <damiano.fantini at gmail.com> |
License: | GPL-2 |
URL: | https://www.data-pulse.com/dev_site/TCGAretriever/ |
NeedsCompilation: | no |
CRAN checks: | TCGAretriever results |
Reference manual: | TCGAretriever.pdf |
Vignettes: |
Getting Started with TCGAretriever |
Package source: | TCGAretriever_1.5.tar.gz |
Windows binaries: | r-devel: TCGAretriever_1.5.zip, r-release: TCGAretriever_1.5.zip, r-oldrel: TCGAretriever_1.5.zip |
macOS binaries: | r-release (arm64): TCGAretriever_1.5.tgz, r-oldrel (arm64): TCGAretriever_1.5.tgz, r-release (x86_64): TCGAretriever_1.5.tgz, r-oldrel (x86_64): TCGAretriever_1.5.tgz |
Old sources: | TCGAretriever archive |
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