clinspacy 0.1.0.9002
- Added a
NEWS.md
file to track changes to the package.
- bind_* functions no longer run clinspacy_init() – this should speed up load times
clinspacy 0.2.0.9000
- Added
NA
to semantic_types
argument for both clinspacy()
and clinspacy_single()
to prevent tokens from being discarded if they do not match a listed semantic type.
- Moved
clinspacy_single()
logic into lapply()
instead of gradually building a list using a for
loop for boost in speed
- Moved progress bar to
clinspacy()
so that it iterates over documents rather than tokens
clinspacy 0.2.0 (2021-02-22)
- Changed lifecycle badge to stable
clinspacy 1.0.0 (2021-02-23)
- Bumped version number to 1.0.0 since it’s ready for CRAN submission
clinspacy 1.0.1 (2021-03-08)
- Bug fix: removed unnecessary arguments and some clean up in prep for CRAN submission
clinspacy 1.0.2 (2021-03-18)
- Fixed documentation prior to CRAN submission based on feedback
- Bug fix: Specified version numbers for spaCy (2.3.0), scispaCy (0.2.5), and medspaCy (0.1.0.2) to ensure that the versions are compatible with one another
- Bug fix: spaCy 2.3.0 must be installed from conda-forge (
pip
set to FALSE
) because the source fails to build properly on Windows even with Visual C++ build tools installed
- Update: Switched to using medspaCy instead of its individual components because medspaCy 0.1.0.2 is compatible with spaCy 2.3.0 (an older version was not).
- Bug fix: changed
section_title
to section_category
due to updates in medspaCy sectionizer API
- Known issue: After first running
clinspacy_init()
on Windows, sometimes it cannot find numpy
. This is a known issue with reticulate
https://github.com/rstudio/reticulate/issues/367. Restarting the R session and re-running clinspacy_init()
appears to fix the issue