fbar 0.6.0
- Fix for new CRAN check for ‘return’ without ‘()’
- Lots of changes to take into account changes in dependencies
- Simplified installation documentation
fbar 0.5.2
- Fix to getBiGG function
- Fix to vignette
fbar 0.4.4
- New function for retrieving models from BiGG
- Changes to model data files
- New data file to help specify exchange reactions
- Changed some function argument defaults
fbar 0.3.4
- Test updates and tidying to work with new version of ROI
- New tests
- Spelling corrections
- Moving to assuming availability of ecos solver. All other solvers still supported
fbar 0.3.3
fbar 0.3.2
- Minor updates for Cran release
fbar 0.3.1
- Created website using pkgdown
fbar 0.3.0
- Moved to new NSE framework
fbar 0.2.2
- Deprecated
expanded_to_gurobi
, expanded_to_glpk
and reactiontbl_to_gurobi
. ROI will now be the only backend.
fbar 0.2.1
- Updated and corrected some test code
- Added test and fix for situation where metabolite is used multiple times in one reaction string
- Small updates to vignettes and readme
fbar 0.2.0
- Added new functions for metabolite parsing
- Added more documentation
fbar 0.1.23
- Added DONTRUN to some examples which take too long on some platforms
fbar 0.1.19
fbar 0.1.18
fbar 0.1.17
- Started moving to using ROI.plugin.ecos for examples and tests, since it has no dependencies
- New function to convert from an expanded model back to a reaction table
- Fixed a bug in the total flux minimization code of find_fluxes_df
fbar 0.1.16
- Changes to tests to reduce chatter further
fbar 0.1.15
- Description changes to remove notes
fbar 0.1.14
- Changed the title
- Changed the description
- Typo fixed
fbar 0.1.13
- Checks and filters in tests, vignette and examples to remove implicit dependency on ROI.plugin.glpk.
- Other pdates and improvements to documentation and examples.
- Updated tests for cleaner output
fbar 0.1.12
- Tweaks and updates for CRAN submission
fbar 0.1.9
- Started using travis for integration
fbar 0.1.8
fbar 0.1.1
- Changed optimization framework - can now use one of a choice of optimizers
- Lots more documentation
- Name changes and refactoring