localScore: Package for Sequence Analysis by Local Score

Functionalities for calculating the local score and calculating statistical relevance (p-value) to find a local Score in a sequence of given distribution (S. Mercier and J.-J. Daudin (2001) <https://hal.archives-ouvertes.fr/hal-00714174>) ; S. Karlin and S. Altschul (1990) <https://www.ncbi.nlm.nih.gov/pmc/articles/PMC53667/> ; S. Mercier, D. Cellier and F. Charlot (2003) <https://hal.archives-ouvertes.fr/hal-00937529v1> ; A. Lagnoux, S. Mercier and P. Valois (2017) <doi:10.1093/bioinformatics/btw699> ).

Version:	1.0.8
Depends:	R (≥ 3.2.0)
Imports:	Rcpp (≥ 0.12.16), utils
LinkingTo:	Rcpp
Suggests:	knitr, rmarkdown, testthat (≥ 2.1.0)
Published:	2022-05-17
Author:	Sebastian Simon [aut], David Robelin [aut, cre], Sabine Mercier [aut], Sebastien Dejean [aut], The authors of Eigen the library for the included version of Eigen [cph]
Maintainer:	David Robelin <david.robelin at inrae.fr>
License:	GPL-2 | GPL-3 | file LICENSE [expanded from: GPL (≥ 2) | file LICENSE]
Copyright:	See the file COPYRIGHTS for various embedded Eigen library copyright details
NeedsCompilation:	yes
SystemRequirements:	C++11
CRAN checks:	localScore results

Documentation:

Reference manual:	localScore.pdf
Vignettes:	Local Score Package

Downloads:

Package source:	localScore_1.0.8.tar.gz
Windows binaries:	r-devel: localScore_1.0.8.zip, r-release: localScore_1.0.8.zip, r-oldrel: localScore_1.0.8.zip
macOS binaries:	r-release (arm64): localScore_1.0.8.tgz, r-oldrel (arm64): localScore_1.0.8.tgz, r-release (x86_64): localScore_1.0.8.tgz, r-oldrel (x86_64): localScore_1.0.8.tgz
Old sources:	localScore archive

Linking:

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