Evaluation of diversity in peptide libraries, including NNN, NNB, NNK/S, and 20/20 schemes. Custom encoding schemes can also be defined. Metrics for evaluation include expected coverage, relative efficiency, and the functional diversity of the library. Peptide-level inclusion probabilities are computable for both the native and custom encoding schemes.
| Version: | 0.2.2 |
| Depends: | R (≥ 3.0.2) |
| Imports: | discreteRV (≥ 1.2), plyr, dplyr |
| Suggests: | ggplot2 |
| Published: | 2015-09-16 |
| Author: | Heike Hofmann [aut], Eric Hare [aut, cre], GGobi Foundation [aut] |
| Maintainer: | Eric Hare <erichare at iastate.edu> |
| BugReports: | https://github.com/heike/peptider/issues |
| License: | GPL-3 |
| URL: | https://github.com/heike/peptider |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | peptider results |
| Reference manual: | peptider.pdf |
| Package source: | peptider_0.2.2.tar.gz |
| Windows binaries: | r-devel: peptider_0.2.2.zip, r-release: peptider_0.2.2.zip, r-oldrel: peptider_0.2.2.zip |
| macOS binaries: | r-release (arm64): peptider_0.2.2.tgz, r-oldrel (arm64): peptider_0.2.2.tgz, r-release (x86_64): peptider_0.2.2.tgz, r-oldrel (x86_64): peptider_0.2.2.tgz |
| Old sources: | peptider archive |
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