pcgen: Reconstruction of Causal Networks for Data with Random Genetic Effects

Implements the pcgen algorithm, which is a modified version of the standard pc-algorithm, with specific conditional independence tests and modified orientation rules. pcgen extends the approach of Valente et al. (2010) <doi:10.1534/genetics.109.112979> with reconstruction of direct genetic effects.

Version:	0.2.0
Depends:	R (≥ 3.1.0)
Imports:	pcalg, graph, Matrix, stats, MASS, utils, Hmisc, methods, lme4, sommer, ggm
Published:	2019-02-18
Author:	Willem Kruijer, Pariya Behrouzi, Maria Xose Rodriguez-Alvarez
Maintainer:	Pariya Behrouzi <pariya.behrouzi at gmail.com>
License:	GPL-3
NeedsCompilation:	no
CRAN checks:	pcgen results

Documentation:

Reference manual:

pcgen.pdf

Downloads:

Package source:	pcgen_0.2.0.tar.gz
Windows binaries:	r-devel: pcgen_0.2.0.zip, r-release: pcgen_0.2.0.zip, r-oldrel: pcgen_0.2.0.zip
macOS binaries:	r-release (arm64): pcgen_0.2.0.tgz, r-oldrel (arm64): pcgen_0.2.0.tgz, r-release (x86_64): pcgen_0.2.0.tgz, r-oldrel (x86_64): pcgen_0.2.0.tgz
Old sources:	pcgen archive

Linking:

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